STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCC_00702Hypothetical protein. (169 aa)    
Predicted Functional Partners:
CCC_00701
Hypothetical protein.
       0.773
CCC_03260
Hypothetical protein.
  
     0.697
CCC_00700
Glyoxylate reductase / Glyoxylate reductase / Hydroxypyruvate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
       0.691
CCC_02243
Outer membrane lipoprotein OmlA.
  
     0.655
CCC_02191
Hypothetical protein.
  
     0.653
CCC_02173
DNA-directed RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
     0.645
CCC_01064
CarD-like transcriptional regulator.
  
     0.621
CCC_00670
ATP-dependent nuclease subunit B.
  
     0.611
recO
DNA recombination and repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
     0.584
CCC_03953
Putative with DnaJ-like domain.
  
     0.574
Your Current Organism:
Magnetospirillum magnetotacticum
NCBI taxonomy Id: 272627
Other names: M. magnetotacticum MS-1, Magnetospirillum magnetotacticum MS-1, Magnetospirillum magnetotacticum str. MS-1, Magnetospirillum magnetotacticum strain MS-1, Magnetospirillum sp. MS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.