STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCC_01082ATPase component NikO of energizing module of nickel ECF transporter. (214 aa)    
Predicted Functional Partners:
CCC_01081
Transmembrane component NikQ of energizing module of nickel ECF transporter.
 
 0.999
CCC_01079
Substrate-specific component NikM of nickel ECF transporter.
 
 0.998
CCC_01232
Transmembrane component CbiQ of energizing module of cobalt ECF transporter.
 
 0.994
CCC_01078
Additional periplasmic component NikK of nickel ECF transporter.
 
  
 0.992
cbiM
Substrate-specific component CbiM of cobalt ECF transporter; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.
  
 0.982
CCC_01080
Additional component NikL of nickel ECF transporter.
 
     0.948
CCC_01233
ATPase component CbiO of energizing module of cobalt ECF transporter; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
  
  
 
0.927
cbiN
Additional substrate-specific component CbiN of cobalt ECF transporter; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.
  
 
 0.843
CCC_01253
Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-3b C17-methyltransferase.
  
 
 0.832
CCC_01251
Cobalt-precorrin-6y C5-methyltransferase / Cobalt-precorrin-6y C15-methyltransferase decarboxylating.
  
 
 0.660
Your Current Organism:
Magnetospirillum magnetotacticum
NCBI taxonomy Id: 272627
Other names: M. magnetotacticum MS-1, Magnetospirillum magnetotacticum MS-1, Magnetospirillum magnetotacticum str. MS-1, Magnetospirillum magnetotacticum strain MS-1, Magnetospirillum sp. MS-1
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