Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CCC_00243 | CCC_00244 | CCC_00243 | CCC_00244 | Molybdenum cofactor biosynthesis protein MoaE. | Molybdenum cofactor biosynthesis protein MoaD. | 0.999 |
CCC_00243 | CCC_01126 | CCC_00243 | CCC_01126 | Molybdenum cofactor biosynthesis protein MoaE. | Molybdopterin biosynthesis protein MoeB. | 0.974 |
CCC_00243 | CCC_02893 | CCC_00243 | CCC_02893 | Molybdenum cofactor biosynthesis protein MoaE. | Molybdopterin converting factor small subunit. | 0.527 |
CCC_00243 | thiG | CCC_00243 | CCC_02078 | Molybdenum cofactor biosynthesis protein MoaE. | Thiazole biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.676 |
CCC_00244 | CCC_00243 | CCC_00244 | CCC_00243 | Molybdenum cofactor biosynthesis protein MoaD. | Molybdenum cofactor biosynthesis protein MoaE. | 0.999 |
CCC_00244 | CCC_01126 | CCC_00244 | CCC_01126 | Molybdenum cofactor biosynthesis protein MoaD. | Molybdopterin biosynthesis protein MoeB. | 0.993 |
CCC_00244 | CCC_01127 | CCC_00244 | CCC_01127 | Molybdenum cofactor biosynthesis protein MoaD. | Cysteine synthase. | 0.743 |
CCC_00244 | CCC_01772 | CCC_00244 | CCC_01772 | Molybdenum cofactor biosynthesis protein MoaD. | Hypothetical protein. | 0.775 |
CCC_00244 | CCC_02893 | CCC_00244 | CCC_02893 | Molybdenum cofactor biosynthesis protein MoaD. | Molybdopterin converting factor small subunit. | 0.571 |
CCC_00244 | CCC_02922 | CCC_00244 | CCC_02922 | Molybdenum cofactor biosynthesis protein MoaD. | Cysteine desulfurase. | 0.653 |
CCC_00244 | iscS | CCC_00244 | CCC_02923 | Molybdenum cofactor biosynthesis protein MoaD. | Cysteine desulfurase IscS subfamily; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily. | 0.653 |
CCC_00244 | thiG | CCC_00244 | CCC_02078 | Molybdenum cofactor biosynthesis protein MoaD. | Thiazole biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.961 |
CCC_00920 | CCC_01126 | CCC_00920 | CCC_01126 | ATP-dependent protease La domain protein. | Molybdopterin biosynthesis protein MoeB. | 0.844 |
CCC_00920 | CCC_01772 | CCC_00920 | CCC_01772 | ATP-dependent protease La domain protein. | Hypothetical protein. | 0.597 |
CCC_01126 | CCC_00243 | CCC_01126 | CCC_00243 | Molybdopterin biosynthesis protein MoeB. | Molybdenum cofactor biosynthesis protein MoaE. | 0.974 |
CCC_01126 | CCC_00244 | CCC_01126 | CCC_00244 | Molybdopterin biosynthesis protein MoeB. | Molybdenum cofactor biosynthesis protein MoaD. | 0.993 |
CCC_01126 | CCC_00920 | CCC_01126 | CCC_00920 | Molybdopterin biosynthesis protein MoeB. | ATP-dependent protease La domain protein. | 0.844 |
CCC_01126 | CCC_01127 | CCC_01126 | CCC_01127 | Molybdopterin biosynthesis protein MoeB. | Cysteine synthase. | 0.865 |
CCC_01126 | CCC_01772 | CCC_01126 | CCC_01772 | Molybdopterin biosynthesis protein MoeB. | Hypothetical protein. | 0.928 |
CCC_01126 | CCC_02893 | CCC_01126 | CCC_02893 | Molybdopterin biosynthesis protein MoeB. | Molybdopterin converting factor small subunit. | 0.970 |
page 1 of 4