Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CCC_01330 | CCC_01331 | Phage terminase large subunit. | Hypothetical protein. | 0.773 |
CCC_01330 | CCC_01332 | Phage terminase large subunit. | Phage portal protein. | 0.953 |
CCC_01330 | CCC_01333 | Phage terminase large subunit. | Hypothetical protein. | 0.927 |
CCC_01330 | CCC_01334 | Phage terminase large subunit. | Putative BACTERIOPHAGE-RELATED PROTEIN. | 0.974 |
CCC_01330 | CCC_01335 | Phage terminase large subunit. | Hypothetical protein; External origin - phage-related functions; elements of external origin phage-related functions and prophages. | 0.929 |
CCC_01330 | CCC_01336 | Phage terminase large subunit. | Hypothetical protein. | 0.929 |
CCC_01330 | CCC_01337 | Phage terminase large subunit. | Hypothetical protein. | 0.931 |
CCC_01330 | CCC_01338 | Phage terminase large subunit. | Hypothetical protein. | 0.930 |
CCC_01330 | CCC_01339 | Phage terminase large subunit. | Site-specific recombinase XerD. | 0.911 |
CCC_01330 | CCC_01340 | Phage terminase large subunit. | Hypothetical protein. | 0.905 |
CCC_01331 | CCC_01330 | Hypothetical protein. | Phage terminase large subunit. | 0.773 |
CCC_01331 | CCC_01332 | Hypothetical protein. | Phage portal protein. | 0.783 |
CCC_01331 | CCC_01333 | Hypothetical protein. | Hypothetical protein. | 0.782 |
CCC_01331 | CCC_01334 | Hypothetical protein. | Putative BACTERIOPHAGE-RELATED PROTEIN. | 0.753 |
CCC_01331 | CCC_01335 | Hypothetical protein. | Hypothetical protein; External origin - phage-related functions; elements of external origin phage-related functions and prophages. | 0.711 |
CCC_01331 | CCC_01336 | Hypothetical protein. | Hypothetical protein. | 0.711 |
CCC_01331 | CCC_01337 | Hypothetical protein. | Hypothetical protein. | 0.711 |
CCC_01331 | CCC_01338 | Hypothetical protein. | Hypothetical protein. | 0.711 |
CCC_01331 | CCC_01339 | Hypothetical protein. | Site-specific recombinase XerD. | 0.632 |
CCC_01331 | CCC_01340 | Hypothetical protein. | Hypothetical protein. | 0.632 |
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