Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
CCC_01409Putative BACTERIOPHAGE-RELATED PROTEIN. (129 aa)    
Predicted Functional Partners:
CCC_01410
Hypothetical protein.
 
  
 0.945
CCC_01408
Hypothetical protein; External origin - phage-related functions; elements of external origin phage-related functions and prophages.
 
     0.942
CCC_01406
Hypothetical protein.
 
     0.910
CCC_01407
Hypothetical protein.
 
     0.907
CCC_01330
Phage terminase large subunit.
 
  
 0.905
CCC_01416
Phage terminase large subunit.
 
  
 0.905
CCC_01626
Phage terminase large subunit.
 
  
 0.895
CCC_00356
Uncharacterized protein containing LysM domain.
  
 
 0.894
CCC_01400
Tail length tape measure protein.
 
   0.845
CCC_01332
Phage portal protein.
 
   
 0.787
Your Current Organism:
Magnetospirillum magnetotacticum
NCBI taxonomy Id: 272627
Other names: M. magnetotacticum MS-1, Magnetospirillum magnetotacticum MS-1, Magnetospirillum magnetotacticum str. MS-1, Magnetospirillum magnetotacticum strain MS-1, Magnetospirillum sp. MS-1
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