Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCC_01944Magnetosome protein MamF. (91 aa)    
Predicted Functional Partners:
CCC_02529
Magnetosome protein MamO; Serine protease precursor MucD/AlgY-like protein.
  
   
 0.810
CCC_02521
Putative transport protein.
  
     0.772
CCC_02525
Rod shape-determining protein MreB.
  
   
 0.767
msrQ
Magnetosome protein MamZ permease Magnetosome protein MamH / Membrane protein YedZ; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons fo [...]
  
     0.683
CCC_01654
Hypothetical protein.
  
     0.681
CCC_00098
Cytochrome c4.
  
     0.614
CCC_02523
Magnetosome protein MamE trypsin-like serine protease.
  
   
 0.612
CCC_01107
Xanthine/uracil/thiamine/ascorbate permease family protein.
   
    0.608
CCC_01943
Magnetosome Protein Mms6.
     
 0.604
CCC_02866
Cytochrome c553.
  
     0.595
Your Current Organism:
Magnetospirillum magnetotacticum
NCBI taxonomy Id: 272627
Other names: M. magnetotacticum MS-1, Magnetospirillum magnetotacticum MS-1, Magnetospirillum magnetotacticum str. MS-1, Magnetospirillum magnetotacticum strain MS-1, Magnetospirillum sp. MS-1
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