Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCC_01965Phenylacetic acid degradation operon negative regulatory protein PaaX. (310 aa)    
Predicted Functional Partners:
CCC_03629
Phenylacetic acid degradation protein paaI.
 
   
 0.813
CCC_01964
Hypothetical protein.
       0.757
CCC_01963
Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY.
 
 
   0.679
cobB
NAD-dependent protein deacetylase of SIR2 family; Belongs to the sirtuin family. Class III subfamily.
   
    0.614
CCC_00720
Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
   
 0.611
CCC_01961
Hypothetical protein.
       0.561
CCC_01962
Sensor histidine kinase/response regulator.
       0.561
CCC_01966
Transcriptional regulator MarR family.
 
    0.515
CCC_03631
Phenylacetate-coenzyme A ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
   
 0.512
CCC_02106
Carbonic anhydrase family 3.
 
  
 0.504
Your Current Organism:
Magnetospirillum magnetotacticum
NCBI taxonomy Id: 272627
Other names: M. magnetotacticum MS-1, Magnetospirillum magnetotacticum MS-1, Magnetospirillum magnetotacticum str. MS-1, Magnetospirillum magnetotacticum strain MS-1, Magnetospirillum sp. MS-1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.