Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCC_02016Hypothetical protein. (103 aa)    
Predicted Functional Partners:
CCC_01290
Serine phosphatase RsbU regulator of sigma subunit.
  
 0.989
CCC_03556
Serine phosphatase RsbU regulator of sigma subunit / Serine-protein kinase RsbW.
  
 0.986
CCC_02124
Hypothetical protein.
 
 0.940
CCC_02015
Serine phosphatase RsbU regulator of sigma subunit.
 
 
  0.935
CCC_03541
Pole remodelling regulatory diguanylate cyclase.
 
 0.916
CCC_02787
Sensory box histidine kinase/response regulator.
  
 
 0.871
CCC_03779
Sensory box histidine kinase/response regulator.
 
 
 0.855
CCC_03542
Serine phosphatase RsbU regulator of sigma subunit.
 
 0.845
CCC_04123
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s).
  
 
 0.835
CCC_03560
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s).
 
 
 0.828
Your Current Organism:
Magnetospirillum magnetotacticum
NCBI taxonomy Id: 272627
Other names: M. magnetotacticum MS-1, Magnetospirillum magnetotacticum MS-1, Magnetospirillum magnetotacticum str. MS-1, Magnetospirillum magnetotacticum strain MS-1, Magnetospirillum sp. MS-1
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.