Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CCC_02107 | CCC_02108 | Formate dehydrogenase -O gamma subunit. | Hypothetical protein. | 0.759 |
CCC_02107 | CCC_02109 | Formate dehydrogenase -O gamma subunit. | Formate dehydrogenase-O iron-sulfur subunit putative formate dehydrogenase iron-sulfur subunit. | 0.998 |
CCC_02107 | CCC_02110 | Formate dehydrogenase -O gamma subunit. | Formate dehydrogenase-O major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.997 |
CCC_02107 | CCC_02111 | Formate dehydrogenase -O gamma subunit. | Formate dehydrogenase subunit or accessory protein. | 0.805 |
CCC_02107 | CCC_02112 | Formate dehydrogenase -O gamma subunit. | Putative formate dehydrogenase-specific chaperone. | 0.958 |
CCC_02108 | CCC_02107 | Hypothetical protein. | Formate dehydrogenase -O gamma subunit. | 0.759 |
CCC_02108 | CCC_02109 | Hypothetical protein. | Formate dehydrogenase-O iron-sulfur subunit putative formate dehydrogenase iron-sulfur subunit. | 0.783 |
CCC_02108 | CCC_02110 | Hypothetical protein. | Formate dehydrogenase-O major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.764 |
CCC_02108 | CCC_02111 | Hypothetical protein. | Formate dehydrogenase subunit or accessory protein. | 0.723 |
CCC_02108 | CCC_02112 | Hypothetical protein. | Putative formate dehydrogenase-specific chaperone. | 0.714 |
CCC_02109 | CCC_02107 | Formate dehydrogenase-O iron-sulfur subunit putative formate dehydrogenase iron-sulfur subunit. | Formate dehydrogenase -O gamma subunit. | 0.998 |
CCC_02109 | CCC_02108 | Formate dehydrogenase-O iron-sulfur subunit putative formate dehydrogenase iron-sulfur subunit. | Hypothetical protein. | 0.783 |
CCC_02109 | CCC_02110 | Formate dehydrogenase-O iron-sulfur subunit putative formate dehydrogenase iron-sulfur subunit. | Formate dehydrogenase-O major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.997 |
CCC_02109 | CCC_02111 | Formate dehydrogenase-O iron-sulfur subunit putative formate dehydrogenase iron-sulfur subunit. | Formate dehydrogenase subunit or accessory protein. | 0.739 |
CCC_02109 | CCC_02112 | Formate dehydrogenase-O iron-sulfur subunit putative formate dehydrogenase iron-sulfur subunit. | Putative formate dehydrogenase-specific chaperone. | 0.947 |
CCC_02110 | CCC_02107 | Formate dehydrogenase-O major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Formate dehydrogenase -O gamma subunit. | 0.997 |
CCC_02110 | CCC_02108 | Formate dehydrogenase-O major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Hypothetical protein. | 0.764 |
CCC_02110 | CCC_02109 | Formate dehydrogenase-O major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Formate dehydrogenase-O iron-sulfur subunit putative formate dehydrogenase iron-sulfur subunit. | 0.997 |
CCC_02110 | CCC_02111 | Formate dehydrogenase-O major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Formate dehydrogenase subunit or accessory protein. | 0.820 |
CCC_02110 | CCC_02112 | Formate dehydrogenase-O major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Putative formate dehydrogenase-specific chaperone. | 0.951 |
page 1 of 2