Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCC_02426Hypothetical protein. (142 aa)    
Predicted Functional Partners:
CCC_02425
Acetyltransferase (GNAT) family.
 
     0.922
CCC_02602
Ferric siderophore transport system periplasmic binding protein TonB.
  
     0.769
CCC_02779
Hypothetical protein.
  
     0.755
CCC_03548
Hypothetical protein.
  
     0.755
CCC_04180
TolA protein.
  
     0.750
CCC_04062
Hypothetical protein.
  
     0.743
CCC_02600
Hypothetical protein.
  
     0.737
CCC_03836
Hypothetical protein.
  
     0.733
CCC_00996
ADP-heptose--lipooligosaccharide heptosyltransferase II.
  
     0.732
CCC_03702
Hypothetical protein.
  
     0.731
Your Current Organism:
Magnetospirillum magnetotacticum
NCBI taxonomy Id: 272627
Other names: M. magnetotacticum MS-1, Magnetospirillum magnetotacticum MS-1, Magnetospirillum magnetotacticum str. MS-1, Magnetospirillum magnetotacticum strain MS-1, Magnetospirillum sp. MS-1
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