Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCC_02430Permeases of the major facilitator superfamily. (388 aa)    
Predicted Functional Partners:
CCC_00469
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.674
CCC_00813
Branched-chain alpha-keto acid dehydrogenase E1 component beta subunit.
     
  0.577
CCC_03707
2-acylglycerophosphoethanolamine acyltransferase.
    
 0.508
CCC_03891
Hypothetical protein.
  
     0.497
CCC_03901
Nitrate/nitrite transporter.
  
  
 0.488
CCC_00486
Secretion protein HlyD family.
  
 0.482
CCC_00717
Putative Co/Zn/Cd efflux system membrane fusion protein.
  
 0.482
CCC_01734
HlyD family secretion protein.
  
 0.482
CCC_02271
Membrane-fusion protein.
  
 0.482
CCC_03289
Type I secretion system membrane fusion protein LapC.
  
 0.482
Your Current Organism:
Magnetospirillum magnetotacticum
NCBI taxonomy Id: 272627
Other names: M. magnetotacticum MS-1, Magnetospirillum magnetotacticum MS-1, Magnetospirillum magnetotacticum str. MS-1, Magnetospirillum magnetotacticum strain MS-1, Magnetospirillum sp. MS-1
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