Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCC_02464Methylmalonyl-CoA epimerase Ethylmalonyl-CoA epimerase. (134 aa)    
Predicted Functional Partners:
CCC_00506
Methylmalonyl-CoA mutase.
 
  
 0.982
CCC_01266
Ethylmalonyl-CoA mutase methylsuccinyl-CoA-forming.
 
  
 0.978
CCC_00503
Propionyl-CoA carboxylase carboxyl transferase subunit.
 
 
 0.968
CCC_03137
Methylmalonyl-CoA mutase.
 
  
 0.924
CCC_01265
Crotonyl-CoA carboxylase/reductase ethylmalonyl-CoA producing.
   
 0.919
CCC_00504
Biotin carboxylase of acetyl-CoA carboxylase / Biotin carboxyl carrier protein of acetyl-CoA carboxylase Propionyl-CoA carboxylase alpha chain.
  
 
 0.911
CCC_03136
B12 binding domain of Methylmalonyl-CoA mutase.
 
  
 0.911
CCC_03493
Acetoacetyl-CoA synthetase leucine.
     
 0.878
CCC_00610
Putative periplasmic protein kinase ArgK and related GTPases of G3E family.
 
 
 0.849
CCC_01907
Pyruvate-flavodoxin oxidoreductase.
    
 0.848
Your Current Organism:
Magnetospirillum magnetotacticum
NCBI taxonomy Id: 272627
Other names: M. magnetotacticum MS-1, Magnetospirillum magnetotacticum MS-1, Magnetospirillum magnetotacticum str. MS-1, Magnetospirillum magnetotacticum strain MS-1, Magnetospirillum sp. MS-1
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