Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCC_02469Putative membrane protein/domain. (173 aa)    
Predicted Functional Partners:
CCC_02468
Flagellar motor rotation protein MotB.
       0.808
CCC_01026
Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit.
  
    0.757
CCC_02467
Flagellar motor rotation protein MotA.
       0.742
CCC_00361
Hypothetical protein.
 
   
 0.702
CCC_00275
Flagellar hook-associated protein FlgL; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
 
   0.682
bpt
Arginine-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily.
     
 0.656
CCC_02777
Kinesin-like protein.
 
     0.646
CCC_00996
ADP-heptose--lipooligosaccharide heptosyltransferase II.
  
     0.616
CCC_04062
Hypothetical protein.
  
     0.588
CCC_00995
ADP-heptose--lipooligosaccharide heptosyltransferase II.
  
     0.560
Your Current Organism:
Magnetospirillum magnetotacticum
NCBI taxonomy Id: 272627
Other names: M. magnetotacticum MS-1, Magnetospirillum magnetotacticum MS-1, Magnetospirillum magnetotacticum str. MS-1, Magnetospirillum magnetotacticum strain MS-1, Magnetospirillum sp. MS-1
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