Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCC_02495H+/citrate symporter. (469 aa)    
Predicted Functional Partners:
CCC_02493
Hypothetical protein.
 
     0.856
CCC_02494
Enoyl-acyl-carrier-protein reductase FMN.
       0.782
CCC_02489
High-affinity branched-chain amino acid transport system permease protein LivH; Belongs to the binding-protein-dependent transport system permease family.
       0.778
CCC_02490
Branched-chain amino acid transport system permease protein LivM; Belongs to the binding-protein-dependent transport system permease family.
       0.778
CCC_02491
Branched-chain amino acid transport ATP-binding protein LivG.
       0.778
CCC_02492
Branched-chain amino acid transport ATP-binding protein LivF.
       0.778
CCC_02496
L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family.
       0.681
CCC_04178
Aerobic C4-dicarboxylate transporter for fumarate L-malate D-malate succunate aspartate; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
    
 0.678
CCC_03434
TRAP dicarboxylate transporter DctQ subunit unknown substrate 3.
  
  
 0.634
CCC_04165
cAMP-binding protein; Catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.
  
     0.621
Your Current Organism:
Magnetospirillum magnetotacticum
NCBI taxonomy Id: 272627
Other names: M. magnetotacticum MS-1, Magnetospirillum magnetotacticum MS-1, Magnetospirillum magnetotacticum str. MS-1, Magnetospirillum magnetotacticum strain MS-1, Magnetospirillum sp. MS-1
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