Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCC_02497TPR domain protein putative component of TonB system. (659 aa)    
Predicted Functional Partners:
CCC_03824
Hypothetical protein.
 
 
 0.897
CCC_02053
TPR repeat-contatining protein.
 
 
 0.879
CCC_03333
TPR repeat-contatining protein.
 
 
0.876
CCC_02890
TPR repeat-contatining protein.
 
 
0.811
CCC_00904
TPR repeat-contatining protein.
 
  
0.800
CCC_00257
TPR domain protein putative component of TonB system.
 
  
0.772
CCC_02034
TPR domain protein putative component of TonB system.
 
  
0.767
CCC_02251
TPR domain protein putative component of TonB system.
 
  
0.767
CCC_01689
TPR repeat-contatining protein.
 
  
  0.732
ribB
3 4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.720
Your Current Organism:
Magnetospirillum magnetotacticum
NCBI taxonomy Id: 272627
Other names: M. magnetotacticum MS-1, Magnetospirillum magnetotacticum MS-1, Magnetospirillum magnetotacticum str. MS-1, Magnetospirillum magnetotacticum strain MS-1, Magnetospirillum sp. MS-1
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