STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCC_02579Magnetosome protein MamE trypsin-like serine protease. (584 aa)    
Predicted Functional Partners:
CCC_02529
Magnetosome protein MamO; Serine protease precursor MucD/AlgY-like protein.
  
 
 
0.885
CCC_00352
Outer membrane protein A precursor.
   
 
 0.840
CCC_02808
Putative serine protease.
  
  
 0.822
CCC_03304
HtrA protease/chaperone protein; Belongs to the peptidase S1C family.
  
  
 
0.706
CCC_02578
Magnetosome protein MamJ.
       0.705
CCC_03333
TPR repeat-contatining protein.
 
 
 0.684
CCC_02577
Serine protease precursor MucD/AlgY associated with sigma factor RpoE.
 
    
0.675
CCC_02525
Rod shape-determining protein MreB.
 
   
 0.666
CCC_01696
Signal transduction histidine kinase.
  
  
 0.638
CCC_02521
Putative transport protein.
  
   
 0.633
Your Current Organism:
Magnetospirillum magnetotacticum
NCBI taxonomy Id: 272627
Other names: M. magnetotacticum MS-1, Magnetospirillum magnetotacticum MS-1, Magnetospirillum magnetotacticum str. MS-1, Magnetospirillum magnetotacticum strain MS-1, Magnetospirillum sp. MS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.