Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CCC_01724 | CCC_02289 | CCC_01724 | CCC_02289 | Shufflon-specific DNA recombinase; Belongs to the 'phage' integrase family. | Integrase; Belongs to the 'phage' integrase family. | 0.442 |
CCC_01724 | CCC_02941 | CCC_01724 | CCC_02941 | Shufflon-specific DNA recombinase; Belongs to the 'phage' integrase family. | Integrase; Belongs to the 'phage' integrase family. | 0.730 |
CCC_01907 | CCC_02289 | CCC_01907 | CCC_02289 | Pyruvate-flavodoxin oxidoreductase. | Integrase; Belongs to the 'phage' integrase family. | 0.665 |
CCC_01907 | CCC_02941 | CCC_01907 | CCC_02941 | Pyruvate-flavodoxin oxidoreductase. | Integrase; Belongs to the 'phage' integrase family. | 0.665 |
CCC_01907 | CCC_03132 | CCC_01907 | CCC_03132 | Pyruvate-flavodoxin oxidoreductase. | Shufflon-specific DNA recombinase. | 0.665 |
CCC_02289 | CCC_01724 | CCC_02289 | CCC_01724 | Integrase; Belongs to the 'phage' integrase family. | Shufflon-specific DNA recombinase; Belongs to the 'phage' integrase family. | 0.442 |
CCC_02289 | CCC_01907 | CCC_02289 | CCC_01907 | Integrase; Belongs to the 'phage' integrase family. | Pyruvate-flavodoxin oxidoreductase. | 0.665 |
CCC_02289 | CCC_02941 | CCC_02289 | CCC_02941 | Integrase; Belongs to the 'phage' integrase family. | Integrase; Belongs to the 'phage' integrase family. | 0.697 |
CCC_02289 | CCC_03053 | CCC_02289 | CCC_03053 | Integrase; Belongs to the 'phage' integrase family. | Competence protein F-like phosphoribosyltransferase domain protein YhgH required for utilization of DNA as sole source of carbon and energy. | 0.491 |
CCC_02289 | CCC_03111 | CCC_02289 | CCC_03111 | Integrase; Belongs to the 'phage' integrase family. | Shufflon-specific DNA recombinase; Belongs to the 'phage' integrase family. | 0.443 |
CCC_02289 | CCC_03132 | CCC_02289 | CCC_03132 | Integrase; Belongs to the 'phage' integrase family. | Shufflon-specific DNA recombinase. | 0.694 |
CCC_02289 | CCC_03892 | CCC_02289 | CCC_03892 | Integrase; Belongs to the 'phage' integrase family. | Cyclohexadienyl dehydrogenase. | 0.495 |
CCC_02289 | CCC_04184 | CCC_02289 | CCC_04184 | Integrase; Belongs to the 'phage' integrase family. | Hypothetical protein; Belongs to the SOS response-associated peptidase family. | 0.493 |
CCC_02289 | apt | CCC_02289 | CCC_03757 | Integrase; Belongs to the 'phage' integrase family. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.489 |
CCC_02940 | CCC_02941 | CCC_02940 | CCC_02941 | Hypothetical protein. | Integrase; Belongs to the 'phage' integrase family. | 0.503 |
CCC_02941 | CCC_01724 | CCC_02941 | CCC_01724 | Integrase; Belongs to the 'phage' integrase family. | Shufflon-specific DNA recombinase; Belongs to the 'phage' integrase family. | 0.730 |
CCC_02941 | CCC_01907 | CCC_02941 | CCC_01907 | Integrase; Belongs to the 'phage' integrase family. | Pyruvate-flavodoxin oxidoreductase. | 0.665 |
CCC_02941 | CCC_02289 | CCC_02941 | CCC_02289 | Integrase; Belongs to the 'phage' integrase family. | Integrase; Belongs to the 'phage' integrase family. | 0.697 |
CCC_02941 | CCC_02940 | CCC_02941 | CCC_02940 | Integrase; Belongs to the 'phage' integrase family. | Hypothetical protein. | 0.503 |
CCC_02941 | CCC_03053 | CCC_02941 | CCC_03053 | Integrase; Belongs to the 'phage' integrase family. | Competence protein F-like phosphoribosyltransferase domain protein YhgH required for utilization of DNA as sole source of carbon and energy. | 0.491 |
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