Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCC_03005Nitrogenase stabilizing/protective protein NifW. (102 aa)    
Predicted Functional Partners:
CCC_03013
Nitrogenase FeMo-cofactor scaffold and assembly protein NifE; Belongs to the NifD/NifK/NifE/NifN family.
 
  
 0.933
CCC_03011
Nitrogenase FeMo-cofactor carrier protein NifX.
 
  
 0.930
CCC_03015
Nitrogenase (molybdenum-iron) beta chain; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family.
 
  
 0.927
CCC_03010
NifX-associated protein.
 
  
 0.920
CCC_03028
Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB.
 
  
 0.920
CCC_03008
Nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ.
 
  
 0.919
CCC_03012
Nitrogenase FeMo-cofactor scaffold and assembly protein NifN; Belongs to the NifD/NifK/NifE/NifN family.
 
  
 0.916
CCC_03025
NifT protein.
 
  
 0.890
CCC_03009
4Fe-4S ferredoxin nitrogenase-associated.
 
  
 0.884
CCC_03006
Homocitrate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
 
  
 0.883
Your Current Organism:
Magnetospirillum magnetotacticum
NCBI taxonomy Id: 272627
Other names: M. magnetotacticum MS-1, Magnetospirillum magnetotacticum MS-1, Magnetospirillum magnetotacticum str. MS-1, Magnetospirillum magnetotacticum strain MS-1, Magnetospirillum sp. MS-1
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