Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCC_03053Competence protein F-like phosphoribosyltransferase domain protein YhgH required for utilization of DNA as sole source of carbon and energy. (242 aa)    
Predicted Functional Partners:
CCC_00289
Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake.
 
 
 0.928
CCC_03674
DNA internalization-related competence protein ComEC/Rec2.
 
  
 0.886
CCC_00966
MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein.
 
  
 0.853
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
  
 0.806
CCC_03892
Cyclohexadienyl dehydrogenase.
   
    0.800
CCC_00365
Flagellar basal-body rod protein FlgC.
   
   0.791
CCC_01877
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
   
   0.791
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
  
 
  0.773
CCC_01981
DNA repair protein RadC; Belongs to the UPF0758 family.
 
    0.762
CCC_03055
Carbon-nitrogen hydrolase / Aliphatic amidase AmiE.
     
 0.746
Your Current Organism:
Magnetospirillum magnetotacticum
NCBI taxonomy Id: 272627
Other names: M. magnetotacticum MS-1, Magnetospirillum magnetotacticum MS-1, Magnetospirillum magnetotacticum str. MS-1, Magnetospirillum magnetotacticum strain MS-1, Magnetospirillum sp. MS-1
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