STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCC_03074Hypothetical protein. (100 aa)    
Predicted Functional Partners:
CCC_03075
Hypothetical protein.
       0.773
CCC_00349
Hypothetical protein.
 
  
 0.740
CCC_04111
Chemotaxis protein methyltransferase CheR.
  
 
 0.717
CCC_01150
Hypothetical protein.
  
    0.694
CCC_03021
Nitrogenase-associated protein NifO; Belongs to the ArsC family.
 
     0.684
CCC_01189
Copper resistance protein D.
  
     0.669
smc
Chromosome partition protein smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.
  
 
 0.653
CCC_04141
ATPase involved in DNA repair.
  
 
 0.653
CCC_00487
Alkaline phosphatase.
  
 
 0.591
CCC_01716
Hypothetical protein.
  
 
 0.591
Your Current Organism:
Magnetospirillum magnetotacticum
NCBI taxonomy Id: 272627
Other names: M. magnetotacticum MS-1, Magnetospirillum magnetotacticum MS-1, Magnetospirillum magnetotacticum str. MS-1, Magnetospirillum magnetotacticum strain MS-1, Magnetospirillum sp. MS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.