STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCC_03108Chemotaxis protein. (174 aa)    
Predicted Functional Partners:
CCC_01282
Signal transduction histidine kinase CheA.
 
 0.992
CCC_01537
Signal transduction histidine kinase CheA.
  
 0.979
CCC_03097
Signal transduction histidine kinase CheA.
  
 0.979
CCC_04118
Chemotaxis protein methyltransferase CheR.
  
 0.921
CCC_03134
Chemotaxis protein methyltransferase CheR.
  
 0.898
CCC_03561
Chemotaxis protein methyltransferase CheR.
  
 0.887
CCC_04111
Chemotaxis protein methyltransferase CheR.
  
 0.887
CCC_02787
Sensory box histidine kinase/response regulator.
  
 0.881
CCC_03562
Sensory box histidine kinase/response regulator.
  
 0.876
CCC_01518
Signal transduction histidine kinase CheA.
  
 0.874
Your Current Organism:
Magnetospirillum magnetotacticum
NCBI taxonomy Id: 272627
Other names: M. magnetotacticum MS-1, Magnetospirillum magnetotacticum MS-1, Magnetospirillum magnetotacticum str. MS-1, Magnetospirillum magnetotacticum strain MS-1, Magnetospirillum sp. MS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.