Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCC_03224Putative acetyltransferases BadL. (142 aa)    
Predicted Functional Partners:
CCC_03223
Rrf2 family transcriptional regulator.
 
 
 
 0.943
CCC_02038
Benzoyl-CoA reductase subunit BadE.
  
     0.745
CCC_02037
Benzoyl-CoA reductase subunit BadF.
  
    0.730
CCC_02039
Benzoyl-CoA reductase subunit BadD.
  
   
 0.729
CCC_02036
Benzoyl-CoA reductase subunit BadG.
  
    0.697
CCC_01017
TsaB protein required for threonylcarbamoyladenosine (t(6)A) formation in tRNA.
  
 
 0.683
CCC_02042
Sorbitol dehydrogenase.
  
     0.652
aroK
Regulatory protein of benzoate catabolism; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
    
 0.645
CCC_02041
Enoyl-CoA hydratase.
  
     0.641
CCC_03485
Branched-chain amino acid ABC transporter amino acid-binding protein.
  
     0.603
Your Current Organism:
Magnetospirillum magnetotacticum
NCBI taxonomy Id: 272627
Other names: M. magnetotacticum MS-1, Magnetospirillum magnetotacticum MS-1, Magnetospirillum magnetotacticum str. MS-1, Magnetospirillum magnetotacticum strain MS-1, Magnetospirillum sp. MS-1
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