STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCC_03324Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. (295 aa)    
Predicted Functional Partners:
CCC_03325
Rod shape-determining protein MreD.
 
 
 0.998
CCC_03323
Rod shape-determining protein MreB.
 
 
 0.995
CCC_03326
Penicillin-binding protein 2 (PBP-2).
 
 
 0.993
mrdB
Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
 
  
 0.969
CCC_02525
Rod shape-determining protein MreB.
 
 
 0.960
CCC_01660
Cell division protein FtsI Peptidoglycan synthetase.
  
 
 0.854
CCC_01981
DNA repair protein RadC; Belongs to the UPF0758 family.
  
  
 0.847
CCC_03063
Outer membrane protein assembly factor YaeT precursor.
 
 
 
 0.839
CCC_00442
Multimodular transpeptidase-transglycosylase.
  
 
 0.667
CCC_00902
Hypothetical protein.
  
     0.666
Your Current Organism:
Magnetospirillum magnetotacticum
NCBI taxonomy Id: 272627
Other names: M. magnetotacticum MS-1, Magnetospirillum magnetotacticum MS-1, Magnetospirillum magnetotacticum str. MS-1, Magnetospirillum magnetotacticum strain MS-1, Magnetospirillum sp. MS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.