Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCC_03399Protein export cytoplasm protein SecA ATPase RNA helicase. (419 aa)    
Predicted Functional Partners:
CCC_04118
Chemotaxis protein methyltransferase CheR.
  
 
 0.847
CCC_03400
Protein export cytoplasm protein SecA ATPase RNA helicase.
 
    
0.845
CCC_03398
Hypothetical protein.
       0.831
CCC_03397
ABC-type multidrug transport system permease component.
       0.817
CCC_01713
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s).
 
 
 0.813
CCC_03779
Sensory box histidine kinase/response regulator.
  
 0.812
CCC_04123
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s).
  
 0.812
CCC_02637
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s).
  
 
 0.779
CCC_01068
DnaJ-class molecular chaperone.
  
     0.768
CCC_00545
Hypothetical protein.
  
     0.765
Your Current Organism:
Magnetospirillum magnetotacticum
NCBI taxonomy Id: 272627
Other names: M. magnetotacticum MS-1, Magnetospirillum magnetotacticum MS-1, Magnetospirillum magnetotacticum str. MS-1, Magnetospirillum magnetotacticum strain MS-1, Magnetospirillum sp. MS-1
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