Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
CCC_03400Protein export cytoplasm protein SecA ATPase RNA helicase. (443 aa)    
Predicted Functional Partners:
CCC_03399
Protein export cytoplasm protein SecA ATPase RNA helicase.
 
    
0.845
CCC_03397
ABC-type multidrug transport system permease component.
 
     0.837
CCC_04118
Chemotaxis protein methyltransferase CheR.
  
 
 0.835
CCC_04062
Hypothetical protein.
  
 
  0.817
CCC_03398
Hypothetical protein.
       0.816
CCC_01713
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s).
 
 
 0.797
CCC_00903
Porin 41 (Por41) precursor.
  
     0.766
CCC_01778
Serine/threonine protein kinase.
  
     0.766
CCC_01777
Acyl-coenzyme A synthetases/AMP-(fatty) acid ligase.
  
     0.765
CCC_00545
Hypothetical protein.
  
     0.763
Your Current Organism:
Magnetospirillum magnetotacticum
NCBI taxonomy Id: 272627
Other names: M. magnetotacticum MS-1, Magnetospirillum magnetotacticum MS-1, Magnetospirillum magnetotacticum str. MS-1, Magnetospirillum magnetotacticum strain MS-1, Magnetospirillum sp. MS-1
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