Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCC_03411Cupin superfamily protein. (141 aa)    
Predicted Functional Partners:
CCC_03410
Glutathione S-transferase family protein.
       0.832
CCC_03412
Copper tolerance protein.
       0.780
CCC_03413
Hypothetical protein.
       0.780
CCC_03409
Hypothetical protein.
       0.537
CCC_03414
Fe-S oxidoreductase.
       0.450
CCC_03415
ADP-ribose pyrophosphatase.
       0.448
CCC_03416
dTDP-4-dehydrorhamnose 3 5-epimerase.
       0.448
CCC_03417
GDP-mannose 4 6-dehydratase.
       0.408
CCC_03418
D-glycero-D-manno-heptose 1-phosphate guanosyltransferase.
       0.408
Your Current Organism:
Magnetospirillum magnetotacticum
NCBI taxonomy Id: 272627
Other names: M. magnetotacticum MS-1, Magnetospirillum magnetotacticum MS-1, Magnetospirillum magnetotacticum str. MS-1, Magnetospirillum magnetotacticum strain MS-1, Magnetospirillum sp. MS-1
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