Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCC_03425Putative transporter. (408 aa)    
Predicted Functional Partners:
CCC_03426
2 4-dihydroxyhept-2-ene-1 7-dioic acid aldolase; Belongs to the HpcH/HpaI aldolase family.
    
  0.837
CCC_00469
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.674
CCC_03308
Flagellar basal-body rod protein FlgF; Belongs to the flagella basal body rod proteins family.
    
   0.655
CCC_03707
2-acylglycerophosphoethanolamine acyltransferase.
  
 
 0.647
CCC_01520
3-oxoacyl- acyl-carrier-protein synthase KASII.
 
  
 0.646
CCC_00187
Homoserine dehydrogenase.
   
  0.637
CCC_00813
Branched-chain alpha-keto acid dehydrogenase E1 component beta subunit.
    
  0.595
CCC_03852
Membrane fusion component of tripartite multidrug resistance system.
 
 0.584
CCC_03427
2-oxo-hepta-3-ene-1 7-dioic acid hydratase.
       0.572
CCC_03428
5-carboxymethyl-2-hydroxymuconate delta-isomerase.
       0.572
Your Current Organism:
Magnetospirillum magnetotacticum
NCBI taxonomy Id: 272627
Other names: M. magnetotacticum MS-1, Magnetospirillum magnetotacticum MS-1, Magnetospirillum magnetotacticum str. MS-1, Magnetospirillum magnetotacticum strain MS-1, Magnetospirillum sp. MS-1
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