Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCC_03444Protein containing domains DUF404 DUF407 DUF403. (814 aa)    
Predicted Functional Partners:
CCC_03445
Protein containing transglutaminase-like domain putative cysteine protease.
 
  
 0.981
CCC_03443
Large protein containing transglutaminase-like domain.
 
  
 0.967
CCC_03441
Hypothetical protein.
 
    0.947
CCC_00445
Glutamate synthase NADPH large chain.
    
  0.818
CCC_02225
Glutamate synthase NADPH large chain.
    
  0.818
CCC_03442
Protein containing domains DUF404 DUF407.
 
   
0.817
CCC_00083
Hypothetical protein.
 
    0.796
CCC_02299
Transglutaminase-like domain.
  
  
 0.635
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
     
  0.586
CCC_00732
UDP-N-acetylmuramate--alanine ligase.
     
  0.494
Your Current Organism:
Magnetospirillum magnetotacticum
NCBI taxonomy Id: 272627
Other names: M. magnetotacticum MS-1, Magnetospirillum magnetotacticum MS-1, Magnetospirillum magnetotacticum str. MS-1, Magnetospirillum magnetotacticum strain MS-1, Magnetospirillum sp. MS-1
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