Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCC_03479Universal stress protein family tandem domain. (271 aa)    
Predicted Functional Partners:
CCC_03478
Phenylacetic acid degradation protein PaaD thioesterase.
       0.773
CCC_03481
3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
     
 0.765
CCC_03480
Butyryl-CoA dehydrogenase.
       0.764
CCC_03482
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.678
CCC_03483
Phenylacetate-coenzyme A ligase.
       0.635
CCC_02977
Hypothetical protein.
 
  
 0.554
CCC_00933
Methylated-DNA--protein-cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.
  
  
 0.546
CCC_03477
GGDEF domain-contatining protein.
       0.510
CCC_01086
Sigma 54 modulation protein YhbH.
  
  
 0.507
CCC_03485
Branched-chain amino acid ABC transporter amino acid-binding protein.
 
     0.499
Your Current Organism:
Magnetospirillum magnetotacticum
NCBI taxonomy Id: 272627
Other names: M. magnetotacticum MS-1, Magnetospirillum magnetotacticum MS-1, Magnetospirillum magnetotacticum str. MS-1, Magnetospirillum magnetotacticum strain MS-1, Magnetospirillum sp. MS-1
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