Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCC_03492Transcriptional regulator GntR family. (219 aa)    
Predicted Functional Partners:
CCC_03493
Acetoacetyl-CoA synthetase leucine.
 
   
 0.603
CCC_00566
Glycolate utilization operon transcriptional activator GlcC.
 
  
 0.584
CCC_03319
Acetolactate synthase small subunit.
  
    0.581
CCC_03494
Enoyl-CoA hydratase valine degradation.
  
    0.521
CCC_03491
Branched-chain acyl-CoA dehydrogenase.
       0.481
CCC_00668
TRAP transporter solute receptor unknown substrate 4.
 
     0.449
CCC_03490
3-hydroxyisobutyrate dehydrogenase.
       0.448
prmC
Release factor glutamine methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.
   
   0.444
CCC_03421
Hypothetical protein.
   
   0.444
CCC_03482
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.410
Your Current Organism:
Magnetospirillum magnetotacticum
NCBI taxonomy Id: 272627
Other names: M. magnetotacticum MS-1, Magnetospirillum magnetotacticum MS-1, Magnetospirillum magnetotacticum str. MS-1, Magnetospirillum magnetotacticum strain MS-1, Magnetospirillum sp. MS-1
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