Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCC_03608N-formylglutamate deformylase. (310 aa)    
Predicted Functional Partners:
CCC_00445
Glutamate synthase NADPH large chain.
     
 0.905
CCC_02225
Glutamate synthase NADPH large chain.
     
 0.905
CCC_03607
Phosphinothricin N-acetyltransferase.
 
     0.840
CCC_02370
Proline dehydrogenase (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
     
 0.800
CCC_03259
Fumarate hydratase class I aerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
  0.738
CCC_01244
NADP-dependent malic enzyme.
     
  0.720
CCC_03368
NADP-dependent malic enzyme.
     
  0.720
CCC_00729
NADH-ubiquinone oxidoreductase chain F.
     
  0.700
CCC_03225
NAD-reducing hydrogenase subunit HoxF.
     
  0.700
CCC_01240
Glutamate synthase NADPH small chain.
     
  0.672
Your Current Organism:
Magnetospirillum magnetotacticum
NCBI taxonomy Id: 272627
Other names: M. magnetotacticum MS-1, Magnetospirillum magnetotacticum MS-1, Magnetospirillum magnetotacticum str. MS-1, Magnetospirillum magnetotacticum strain MS-1, Magnetospirillum sp. MS-1
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