Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCC_04041Putative stomatin/prohibitin-family membrane protease subunit. (265 aa)    
Predicted Functional Partners:
CCC_01584
Cell division protein FtsH.
  
 0.877
ftsH
Cell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.859
CCC_00142
Zinc Protease.
  
 0.721
CCC_00143
Zinc Protease; Belongs to the peptidase M16 family.
  
 0.715
CCC_03221
Mitochondrial processing peptidase-like protein; Belongs to the peptidase M16 family.
  
 0.715
CCC_04118
Chemotaxis protein methyltransferase CheR.
  
 
  0.684
yidC
Inner membrane protein translocase component YidC long form; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.
  
 
 0.682
CCC_01706
Lead cadmium zinc and mercury transporting ATPase Copper-translocating P-type ATPase.
   
 0.676
CCC_04111
Chemotaxis protein methyltransferase CheR.
  
 0.655
CCC_03134
Chemotaxis protein methyltransferase CheR.
  
 
  0.631
Your Current Organism:
Magnetospirillum magnetotacticum
NCBI taxonomy Id: 272627
Other names: M. magnetotacticum MS-1, Magnetospirillum magnetotacticum MS-1, Magnetospirillum magnetotacticum str. MS-1, Magnetospirillum magnetotacticum strain MS-1, Magnetospirillum sp. MS-1
Server load: low (18%) [HD]