Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CCC_01278 | CCC_01281 | CCC_01278 | CCC_01281 | Chemotaxis protein methyltransferase CheR. | Positive regulator of CheA protein activity (CheW). | 0.978 |
CCC_01278 | CCC_01282 | CCC_01278 | CCC_01282 | Chemotaxis protein methyltransferase CheR. | Signal transduction histidine kinase CheA. | 0.981 |
CCC_01278 | CCC_01537 | CCC_01278 | CCC_01537 | Chemotaxis protein methyltransferase CheR. | Signal transduction histidine kinase CheA. | 0.932 |
CCC_01278 | CCC_03094 | CCC_01278 | CCC_03094 | Chemotaxis protein methyltransferase CheR. | Positive regulator of CheA protein activity (CheW). | 0.835 |
CCC_01278 | CCC_03097 | CCC_01278 | CCC_03097 | Chemotaxis protein methyltransferase CheR. | Signal transduction histidine kinase CheA. | 0.937 |
CCC_01278 | CCC_04047 | CCC_01278 | CCC_04047 | Chemotaxis protein methyltransferase CheR. | Hypothetical protein. | 0.949 |
CCC_01278 | CCC_04111 | CCC_01278 | CCC_04111 | Chemotaxis protein methyltransferase CheR. | Chemotaxis protein methyltransferase CheR. | 0.835 |
CCC_01278 | CCC_04118 | CCC_01278 | CCC_04118 | Chemotaxis protein methyltransferase CheR. | Chemotaxis protein methyltransferase CheR. | 0.868 |
CCC_01278 | cheB | CCC_01278 | CCC_01279 | Chemotaxis protein methyltransferase CheR. | Chemotaxis response regulator protein-glutamate methylesterase CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.988 |
CCC_01278 | cheB-2 | CCC_01278 | CCC_01538 | Chemotaxis protein methyltransferase CheR. | Chemotaxis response regulator protein-glutamate methylesterase CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.928 |
CCC_01281 | CCC_01278 | CCC_01281 | CCC_01278 | Positive regulator of CheA protein activity (CheW). | Chemotaxis protein methyltransferase CheR. | 0.978 |
CCC_01281 | CCC_01282 | CCC_01281 | CCC_01282 | Positive regulator of CheA protein activity (CheW). | Signal transduction histidine kinase CheA. | 0.999 |
CCC_01281 | CCC_01537 | CCC_01281 | CCC_01537 | Positive regulator of CheA protein activity (CheW). | Signal transduction histidine kinase CheA. | 0.997 |
CCC_01281 | CCC_03094 | CCC_01281 | CCC_03094 | Positive regulator of CheA protein activity (CheW). | Positive regulator of CheA protein activity (CheW). | 0.951 |
CCC_01281 | CCC_03097 | CCC_01281 | CCC_03097 | Positive regulator of CheA protein activity (CheW). | Signal transduction histidine kinase CheA. | 0.997 |
CCC_01281 | CCC_04047 | CCC_01281 | CCC_04047 | Positive regulator of CheA protein activity (CheW). | Hypothetical protein. | 0.972 |
CCC_01281 | CCC_04111 | CCC_01281 | CCC_04111 | Positive regulator of CheA protein activity (CheW). | Chemotaxis protein methyltransferase CheR. | 0.966 |
CCC_01281 | CCC_04118 | CCC_01281 | CCC_04118 | Positive regulator of CheA protein activity (CheW). | Chemotaxis protein methyltransferase CheR. | 0.992 |
CCC_01281 | cheB | CCC_01281 | CCC_01279 | Positive regulator of CheA protein activity (CheW). | Chemotaxis response regulator protein-glutamate methylesterase CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.990 |
CCC_01281 | cheB-2 | CCC_01281 | CCC_01538 | Positive regulator of CheA protein activity (CheW). | Chemotaxis response regulator protein-glutamate methylesterase CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.970 |
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