Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCC_04097Capsular polysaccharide biosynthesis protein. (257 aa)    
Predicted Functional Partners:
CCC_00387
UDP-glucose 6-dehydrogenase.
  
  
 0.870
CCC_02966
dTDP-glucose 4 6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.870
CCC_00840
UDP-galactopyranose mutase.
  
  
 0.860
CCC_04083
Mycofactocin system glycosyltransferase.
 
  
 0.735
CCC_00741
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon).
  
  
 0.729
CCC_00742
Glucose-1-phosphate thymidylyltransferase.
  
  
 0.729
CCC_02967
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
 0.729
CCC_03449
Conserved expressed protein.
 
  
 0.700
CCC_01907
Pyruvate-flavodoxin oxidoreductase.
    
  0.680
CCC_00815
dTDP-4-dehydrorhamnose 3 5-epimerase.
  
  
 0.671
Your Current Organism:
Magnetospirillum magnetotacticum
NCBI taxonomy Id: 272627
Other names: M. magnetotacticum MS-1, Magnetospirillum magnetotacticum MS-1, Magnetospirillum magnetotacticum str. MS-1, Magnetospirillum magnetotacticum strain MS-1, Magnetospirillum sp. MS-1
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