STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS38206.1Putative HTH-type transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (462 aa)    
Predicted Functional Partners:
pdxY
Pyridoxal kinase 2/pyridoxine kinase; Function of strongly homologous gene; enzyme; Belongs to the pyridoxine kinase family.
  
  
 0.619
tehA
Tellurite resistance protein tehA.
       0.519
ACS38214.1
GCN5-related N-acetyltransferase.
 
     0.488
ACS38204.1
Cytochrome c family protein; Function of strongly homologous gene; carrier.
       0.486
ACS38211.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.466
ACS38213.1
Radical SAM domain protein.
 
     0.464
ACS38207.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.463
ACS38203.1
Hypothetical protein; No homology to any previously reported sequences.
       0.434
ACS38217.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
    0.428
ACS38212.1
Putative nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
    0.404
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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