STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
motCChemotaxis protein MotC; Function of homologous gene experimentally demonstrated in an other organism; factor. (459 aa)    
Predicted Functional Partners:
motB
Chemotaxis protein MotB; Function of strongly homologous gene; structure.
     
 0.836
fliF
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
  
    0.803
ACS38398.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.800
ACS41670.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
    
 
 0.730
motB-2
Flagellar motor protein MotB; Function of strongly homologous gene; structure.
     
 0.709
ftsK
DNA-binding membrane protein required for chromosome resolution and partitioning; Function of strongly homologous gene; cell process.
   
 
 0.702
ftsK-2
Cell division protein; Function of strongly homologous gene; cell process; Belongs to the FtsK/SpoIIIE/SftA family.
   
 
 0.702
fliR-2
Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.
     
 0.684
flgC-2
Flagellar basal-body rod protein flgC; Function of strongly homologous gene; structure; Belongs to the flagella basal body rod proteins family.
     
 0.681
flgE-2
Putative Flagellar hook protein flgE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; structure.
     
 0.680
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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