STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS38882.1Conserved hypothetical protein, PAS domain S-box; Homologs of previously reported genes of unknown function. (149 aa)    
Predicted Functional Partners:
ACS42480.1
Putative PAS sensor hybrid histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
 
 
 0.727
ACS38881.1
Hypothetical protein; Doubtful CDS.
       0.693
frc
formyl-CoA transferase, NAD(P)-binding; Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl- CoA to oxalate; Belongs to the CoA-transferase III family. Frc subfamily.
 
     0.597
ACS40792.1
Putative sensor hybrid histidine kinase with two PAS and two response regulator receiver domains; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
 
 0.565
ACS39557.1
Hypothetical protein; No homology to any previously reported sequences.
  
 
 0.542
ACS41454.1
Putative sensor protein gacS (Synonyms : lemA); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.517
ACS38880.1
Conserved hypothetical protein with putative OsmC-like domain; Homologs of previously reported genes of unknown function.
       0.503
ACS39475.1
Hypothetical protein; No homology to any previously reported sequences.
  
 
 0.476
ACS38879.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.444
ACS39476.1
Putative sensor hybrid histidine kinase with PAS and two responser regulator receiver domains; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.419
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.