STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cydACytochrome d terminal oxidase, polypeptide subunit I; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (529 aa)    
Predicted Functional Partners:
cydB
Cytochrome d terminal oxidase, polypeptide subunit II; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 0.993
ACS39031.1
Putative ABC transporter related, fused ATPase and permease domains (CydD-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
 0.979
qxtB-2
Cytochrome bd-quinol oxidase subunit II; Function of strongly homologous gene; enzyme.
 
 0.961
ACS39030.1
Putative ABC transporter related, fused ATPase and permease domains (CydD-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
  
 0.960
qxtB
Cytochrome bd ubiquinol oxidase, subunit II; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 0.949
ACS39762.1
Putative cytochrome bd-quinol oxidase subunit I; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 
0.919
ACS41844.1
Putative cytochrome bd-quinol oxidase subunit I (QxtA-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 
0.917
ACS39034.1
Cyd operon protein YbgT precursor.
  
 
 0.851
ACS38822.1
FAD-dependent pyridine nucleotide-disulphide oxidoreductase:Rubredoxin-type Fe(Cys)4 protein; Function of strongly homologous gene; enzyme.
  
  
 0.539
petB
Ubiquinol-cytochrome c reductase complex, cytochrome b subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
 0.492
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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