STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS39313.1Conserved hypothetical protein, putative membrane protein; Homologs of previously reported genes of unknown function. (239 aa)    
Predicted Functional Partners:
ACS42302.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.769
ACS40608.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.730
ACS39340.1
Putative DNA polymerase III, delta subunit, holA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.727
ACS42491.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.716
ACS38289.1
Conserved hypothetical protein precursor; Homologs of previously reported genes of unknown function.
  
     0.679
oxaA
Transmembrane protein, OxaA-like, preprotein translocase component; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.
  
     0.679
ACS38491.1
Putative DsbB-like disulfide oxidoreductase precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.669
secB
Protein-export protein SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA.
 
     0.666
ACS40699.1
Conserved hypothetical protein, UPF0335 protein; Homologs of previously reported genes of unknown function; Belongs to the UPF0335 family.
  
     0.636
ACS42054.1
Conserved hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
  
     0.634
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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