STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS39757.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (220 aa)    
Predicted Functional Partners:
yeiM
Putative sodium/proton nucleoside transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
     
 0.549
trmB
tRNA (guanine-N(7)-)-methyltransferase (tRNA(m7G46)- methyltransferase); Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
   
 
 0.454
ACS41504.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.422
ACS39835.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.414
ACS42469.1
Permease of major facilitator transporter (tat pathway signal); Function of strongly homologous gene; transporter.
  
     0.401
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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