STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS39907.1TonB-dependent siderophore receptor; Function of strongly homologous gene; transporter. (726 aa)    
Predicted Functional Partners:
ACS42679.1
Hypothetical protein; No homology to any previously reported sequences.
 
  
 0.853
ACS39906.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
  
 0.762
ACS41783.1
Putative FecR, iron siderophore sensor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
  
 0.596
ACS42680.1
Putative enterobactin synthase multienzyme complex component, ATP-dependent; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.506
ftr
Iron permease FTR1; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
   
  
 0.498
ACS41784.1
RNA polymerase sigma factor; Function of strongly homologous gene; factor; Belongs to the sigma-70 factor family. ECF subfamily.
  
  
 0.492
ACS42231.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
    0.461
ACS39905.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.435
ACS41969.1
TonB-dependent receptor/siderophore receptor protein; Function of strongly homologous gene; transporter.
  
  
 0.416
ACS39888.1
Putative TonB-dependent receptor/siderophore receptor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
  
  
 0.403
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.