STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS40397.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (79 aa)    
Predicted Functional Partners:
copA-2
Copper-transporting ATPase CopA; Function of strongly homologous gene; transporter.
  
 
 0.862
sod
Superoxide dismutase [Cu-Zn] precursor; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
   
 0.828
ACS40398.1
Major facilitator superfamily (MFS_1) protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
       0.773
ACS40395.1
Hypothetical protein; No homology to any previously reported sequences.
       0.740
ACS40396.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.740
cueR
DNA-binding transcriptional activator of copper-responsive regulon genes; Function of homologous gene experimentally demonstrated in an other organism; regulator.
  
  
 0.662
ACS40393.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.631
actP
Cation transporting P-type ATPase; Function of homologous gene experimentally demonstrated in an other organism; transporter.
  
 
 0.625
actP-3
Cation transporting P-type ATPase; Function of homologous gene experimentally demonstrated in an other organism; transporter.
  
 
 0.625
ACS38816.1
Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase:Heavy metal translocating P-type ATPase; Function of strongly homologous gene; transporter.
  
 
 0.500
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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