STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
flgB-2Flagellar basal-body rod protein FlgB; Function of strongly homologous gene; structure. (138 aa)    
Predicted Functional Partners:
fliE-2
Flagellar hook-basal body complex protein FliE; Function of strongly homologous gene; factor.
 
 
 0.998
flgC-2
Flagellar basal-body rod protein flgC; Function of strongly homologous gene; structure; Belongs to the flagella basal body rod proteins family.
 
 
 0.994
fliE
Flagellar hook-basal body complex protein FliE; Function of strongly homologous gene; structure.
 
 
 0.988
fliM-2
Flagellar motor switch protein FliM; Function of strongly homologous gene; structure.
 
  
 0.981
ACS42115.1
Putative flagellar basal-body rod modification protein (Synonyms : FlgD flaV, fla FIV, fla FVI); Required for flagellar hook formation. May act as a scaffolding protein.
 
 
 0.979
fliF-2
Flagellar biosynthesis; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
 
 0.978
flgE-2
Putative Flagellar hook protein flgE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; structure.
 
 
 0.976
flgH-2
Flagellar L-ring protein precursor (Basal body L-ring protein); Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
 
 0.974
fliL-2
Flagellar fliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
  
 0.966
ACS42116.1
Putative flagellar hook length determination protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
 
  
 0.966
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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