STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ntaAPutative oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (431 aa)    
Predicted Functional Partners:
ACS41438.1
acyl-CoA dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; putative enzyme.
 
    0.765
ACS41288.1
Putative acyl-CoA dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
    0.724
ssuE
NAD(P)H-dependent FMN reductase; Function of strongly homologous gene; enzyme.
 
 
 0.605
ACS41605.1
acyl-CoA dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; putative enzyme.
 
    0.571
ACS42679.1
Hypothetical protein; No homology to any previously reported sequences.
   
 
 0.505
ACS41067.1
Putative integral membrane protein, putative Band 7 protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.
       0.491
ACS42680.1
Putative enterobactin synthase multienzyme complex component, ATP-dependent; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
 
 0.425
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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