STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS41898.1Conserved hypothetical protein, hemolysin-type calcium-binding repeat protein; Homologs of previously reported genes of unknown function. (540 aa)    
Predicted Functional Partners:
ACS41168.1
Conserved hypothetical protein, putative protease-like protein; Homologs of previously reported genes of unknown function; putative enzyme.
 
  
  0.991
ACS42146.1
Hypothetical protein; No homology to any previously reported sequences.
  
  
  0.976
ACS40317.1
Hypothetical protein; No homology to any previously reported sequences.
 
  
 
0.947
ACS42145.1
Hypothetical protein; No homology to any previously reported sequences.
  
     0.774
ACS38835.1
Type I secretion system ATPase; Function of strongly homologous gene; transporter.
 
 
 0.758
ACS38836.1
Type I secretion membrane fusion protein, HlyD family; Function of strongly homologous gene; transporter.
 
  
 0.747
ACS40688.1
Putative type I secretion system ATPase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
 
 0.735
ACS40689.1
Putative type I secretion membrane fusion protein, HlyD family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
  
 0.726
nadD
Probable nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
   
 
 0.684
xcpT
General secretion pathway protein G precursor (PilD-dependent protein pddA).
     
 0.664
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.