STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS41932.1Putative DNA-binding protein, hemimethylated (yccV-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; factor. (112 aa)    
Predicted Functional Partners:
ACS39792.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.686
ACS41931.1
Putative carbon-carbon lyase, HpcH/HpaI aldolase/citrate lyase family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the HpcH/HpaI aldolase family.
       0.598
ACS39770.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the UPF0262 family.
  
     0.524
ACS40052.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
   
 0.511
ACS38555.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.465
ACS41933.1
Putative diguanylate cyclase precursor (GGDEF motif); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.455
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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