STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS42658.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (140 aa)    
Predicted Functional Partners:
ACS42651.1
Putative seryl-tRNA synthetase (Serine--tRNA ligase); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.770
acd
acyl-CoA dehydrogenase; Function of strongly homologous gene; enzyme.
  
     0.768
ACS42648.1
Putative o-succinylbenzoate--CoA ligase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.620
ACS39358.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.597
ACS42657.1
Putative branched-chain amino acid aminotransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.563
ACS39903.1
Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
     0.562
ACS38634.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.550
ACS38655.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.524
ACS39393.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.523
ACS39199.1
Transcriptional regulator, MarR family; Function of strongly homologous gene; regulator.
  
     0.494
Your Current Organism:
Methylorubrum extorquens
NCBI taxonomy Id: 272630
Other names: M. extorquens AM1, Methylobacterium extorquens AM1, Methylorubrum extorquens AM1, Pseudomonas sp. AM1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.