MSC_0482 protein (Mycoplasma mycoides) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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MSC_0482

Hypothetical protein. (106 aa)

Predicted Functional Partners:

MSC_0481

0.844

plsX

0.685

rnc

0.676

rpmB

0.587

sun

0.450

Your Current Organism:

Mycoplasma mycoides

NCBI taxonomy Id: 272632
Other names: M. mycoides subsp. mycoides SC str. PG1, Mycoplasma mycoides subsp. mycoides SC str. PG1, Mycoplasma mycoides subsp. mycoides SC strain PG1

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MSC_0481	MSC_0482	MSC_0481	MSC_0482	PREDICTED KINASE RELATED TO HYDROXYACETONE KINASE.	Hypothetical protein.	0.844
MSC_0481	plsX	MSC_0481	MSC_0480	PREDICTED KINASE RELATED TO HYDROXYACETONE KINASE.	Fatty acid/phospholipid synthesis PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.	0.777
MSC_0481	rnc	MSC_0481	MSC_0479	PREDICTED KINASE RELATED TO HYDROXYACETONE KINASE.	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	0.776
MSC_0481	rpmB	MSC_0481	MSC_0483	PREDICTED KINASE RELATED TO HYDROXYACETONE KINASE.	50S RIBOSOMAL PROTEIN L28; Belongs to the bacterial ribosomal protein bL28 family.	0.547
MSC_0481	sun	MSC_0481	MSC_0217	PREDICTED KINASE RELATED TO HYDROXYACETONE KINASE.	Sun family protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.	0.450
MSC_0482	MSC_0481	MSC_0482	MSC_0481	Hypothetical protein.	PREDICTED KINASE RELATED TO HYDROXYACETONE KINASE.	0.844
MSC_0482	plsX	MSC_0482	MSC_0480	Hypothetical protein.	Fatty acid/phospholipid synthesis PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.	0.685
MSC_0482	rnc	MSC_0482	MSC_0479	Hypothetical protein.	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	0.676
MSC_0482	rpmB	MSC_0482	MSC_0483	Hypothetical protein.	50S RIBOSOMAL PROTEIN L28; Belongs to the bacterial ribosomal protein bL28 family.	0.587
MSC_0482	sun	MSC_0482	MSC_0217	Hypothetical protein.	Sun family protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.	0.450
plsX	MSC_0481	MSC_0480	MSC_0481	Fatty acid/phospholipid synthesis PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.	PREDICTED KINASE RELATED TO HYDROXYACETONE KINASE.	0.777
plsX	MSC_0482	MSC_0480	MSC_0482	Fatty acid/phospholipid synthesis PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.	Hypothetical protein.	0.685
plsX	rnc	MSC_0480	MSC_0479	Fatty acid/phospholipid synthesis PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	0.876
plsX	rpmB	MSC_0480	MSC_0483	Fatty acid/phospholipid synthesis PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.	50S RIBOSOMAL PROTEIN L28; Belongs to the bacterial ribosomal protein bL28 family.	0.600
rnc	MSC_0481	MSC_0479	MSC_0481	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	PREDICTED KINASE RELATED TO HYDROXYACETONE KINASE.	0.776
rnc	MSC_0482	MSC_0479	MSC_0482	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	Hypothetical protein.	0.676
rnc	plsX	MSC_0479	MSC_0480	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	Fatty acid/phospholipid synthesis PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.	0.876
rnc	rpmB	MSC_0479	MSC_0483	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	50S RIBOSOMAL PROTEIN L28; Belongs to the bacterial ribosomal protein bL28 family.	0.891
rnc	sun	MSC_0479	MSC_0217	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	Sun family protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.	0.752
rpmB	MSC_0481	MSC_0483	MSC_0481	50S RIBOSOMAL PROTEIN L28; Belongs to the bacterial ribosomal protein bL28 family.	PREDICTED KINASE RELATED TO HYDROXYACETONE KINASE.	0.547

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