STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
abc-11ABC transporter, ATP-binding component (vitamin B12?); ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. (408 aa)    
Predicted Functional Partners:
abc-9
ABC transporter, permease component (vitamin B12?).
 
 0.999
abc-10
ABC transporter, ATP-binding component (vitamin B12?); ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
  
0.987
truA
Pseudouridylate synthase I; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
  
  
 0.888
MSC_0374
Hypothetical transmembrane protein.
   
 
 0.824
MSC_0941
Conserved HYPOTHETICAL PROTEIN.
   
 
 0.824
MSC_0063
Hypothetical transmembrane protein.
   
 
 0.814
oppD
Oligopeptide ABC transporter, ATP-binding component; Belongs to the ABC transporter superfamily.
     
0.808
MSC_0958
Conserved hypothetical transmembrane protein.
 
 
 
 0.801
oppF-3
Oligopeptide ABC transporter, permease component; Truncated.
  
0.744
oppF-4
Oligopeptide ABC transporter, ATP-binding component; Truncated; Belongs to the ABC transporter superfamily.
 
  
0.704
Your Current Organism:
Mycoplasma mycoides
NCBI taxonomy Id: 272632
Other names: M. mycoides subsp. mycoides SC str. PG1, Mycoplasma mycoides subsp. mycoides SC str. PG1, Mycoplasma mycoides subsp. mycoides SC strain PG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.