close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
abc-13ABC TRANSPORTER, substrate-binding component; Part of a high-affinity transport system. (477 aa)    
Predicted Functional Partners:
phnB
Alkylphosphonate ABC transporter, permease component.
 
  
 0.962
phnD
Alkylphosphonate ABC transporter, substrate-bindin; Part of a high-affinity transport system.
  
  
 
0.900
phnC-2
Alkylphosphonate ABC transporter, ATP-binding component.
 
  
  0.880
abc-12
ABC transporter, permease component; Truncated.
 
   
 0.879
phnC-3
Alkylphosphonate ABC transporter, ATP-binding component.
 
     0.861
lppB
Prolipoprotein B.
  
   
 0.858
phnE
Phosphonate ABC transporter, permease component.
    
 0.823
phnC
Phosphonate ABC transporter, ATP-binding component; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
    
  0.813
MSC_0084
Conserved HYPOTHETICAL PROTEIN.
  
     0.760
MSC_0963
Conserved hypothetical protein.
  
     0.753
Your Current Organism:
Mycoplasma mycoides
NCBI taxonomy Id: 272632
Other names: M. mycoides subsp. mycoides SC str. PG1, Mycoplasma mycoides subsp. mycoides SC str. PG1, Mycoplasma mycoides subsp. mycoides SC strain PG1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.